Vacuole

Cell biology
Cell biology
Animal cell diagram
	Components of a typical animal cell: Nucleolus; Nucleus; Ribosome (dots as part of 5); Vesicle; Rough endoplasmic reticulum; Golgi apparatus (or, Golgi body); Cytoskeleton; Smooth endoplasmic reticulum; Mitochondrion; Vacuole; Cytosol (fluid that contains organelles; with which, comprises cytoplasm); Lysosome; Centrosome; Cell membrane;

A vacuole (/ˈvækjuːoʊl/) is a membrane-bound organelle which is present in plant and fungal cells and some protist, animal, and bacterial cells.^[1]^[2] Vacuoles are essentially enclosed compartments which are filled with water containing inorganic and organic molecules including enzymes in solution, though in certain cases they may contain solids which have been engulfed. Vacuoles are formed by the fusion of multiple membrane vesicles and are effectively just larger forms of these.^[3] The organelle has no basic shape or size; its structure varies according to the requirements of the cell.

Discovery

Contractile vacuoles ("stars") were first observed by Spallanzani (1776) in protozoa, although mistaken for respiratory organs. Dujardin (1841) named these "stars" as vacuoles. In 1842, Schleiden applied the term for plant cells, to distinguish the structure with cell sap from the rest of the protoplasm.^[4]^[5]^[6]^[7]

In 1885, de Vries named the vacuole membrane as tonoplast.^[8]

Function

The function and significance of vacuoles varies greatly according to the type of cell in which they are present, having much greater prominence in the cells of plants, fungi and certain protists than those of animals and bacteria. In general, the functions of the vacuole include:

Isolating materials that might be harmful or a threat to the cell
Containing waste products
Containing water in plant cells
Maintaining internal hydrostatic pressure or turgor within the cell
Maintaining an acidic internal pH
Containing small molecules
Exporting unwanted substances from the cell
Allowing plants to support structures such as leaves and flowers due to the pressure of the central vacuole
By increasing in size, allowing the germinating plant or its organs (such as leaves) to grow very quickly and through using up mostly just water.^[9]
In seeds, storing proteins needed for germination (these are kept in 'protein bodies', which are modified vacuoles).^[10]

Vacuoles also play a major role in autophagy, maintaining a balance between biogenesis (production) and degradation (or turnover), of many substances and cell structures in certain organisms. They also aid in the lysis and recycling of misfolded proteins that have begun to build up within the cell. Thomas Boller^[11] and others proposed that the vacuole participates in the destruction of invading bacteria and Robert B. Mellor proposed organ-specific forms have a role in 'housing' symbiotic bacteria. In protists,^[12] vacuoles have the additional function of storing food which has been absorbed by the organism and assisting in the digestive and waste management process for the cell.^[13]

In animal cells, vacuoles perform mostly subordinate roles, assisting in larger processes of exocytosis and endocytosis.

Animal vacuoles are smaller than their plant counterparts but also usually greater in number.^[14] There are also animal cells that do not have any vacuoles.^[15]

Exocytosis is the extrusion process of proteins and lipids from the cell. These materials are absorbed into secretory granules within the Golgi apparatus before being transported to the cell membrane and secreted into the extracellular environment. In this capacity, vacuoles are simply storage vesicles which allow for the containment, transport and disposal of selected proteins and lipids to the extracellular environment of the cell.

Endocytosis is the reverse of exocytosis and can occur in a variety of forms. Phagocytosis ("cell eating") is the process by which bacteria, dead tissue, or other bits of material visible under the microscope are engulfed by cells. The material makes contact with the cell membrane, which then invaginates. The invagination is pinched off, leaving the engulfed material in the membrane-enclosed vacuole and the cell membrane intact. Pinocytosis ("cell drinking") is essentially the same process, the difference being that the substances ingested are in solution and not visible under the microscope.^[16] Phagocytosis and pinocytosis are both undertaken in association with lysosomes which complete the breakdown of the material which has been engulfed.^[17]

Salmonella is able to survive and reproduce in the vacuoles of several mammal species after being engulfed.^[18]

The vacuole probably evolved several times independently, even within the Viridiplantae.^[14]

Types

Central

Most mature plant cells have one large vacuole that typically occupies more than 30% of the cell's volume, and that can occupy as much as 80% of the volume for certain cell types and conditions.^[19] Strands of cytoplasm often run through the vacuole.

A vacuole is surrounded by a membrane called the tonoplast (word origin: Gk tón(os) + -o-, meaning “stretching”, “tension”, “tone” + comb. form repr. Gk plastós formed, molded) and filled with cell sap. Also called the vacuolar membrane, the tonoplast is the cytoplasmic membrane surrounding a vacuole, separating the vacuolar contents from the cell's cytoplasm. As a membrane, it is mainly involved in regulating the movements of ions around the cell, and isolating materials that might be harmful or a threat to the cell.^[20]

Transport of protons from the cytosol to the vacuole stabilizes cytoplasmic pH, while making the vacuolar interior more acidic creating a proton motive force which the cell can use to transport nutrients into or out of the vacuole. The low pH of the vacuole also allows degradative enzymes to act. Although single large vacuoles are most common, the size and number of vacuoles may vary in different tissues and stages of development. For example, developing cells in the meristems contain small provacuoles and cells of the vascular cambium have many small vacuoles in the winter and one large one in the summer.

Aside from storage, the main role of the central vacuole is to maintain turgor pressure against the cell wall. Proteins found in the tonoplast (aquaporins) control the flow of water into and out of the vacuole through active transport, pumping potassium (K⁺) ions into and out of the vacuolar interior. Due to osmosis, water will diffuse into the vacuole, placing pressure on the cell wall. If water loss leads to a significant decline in turgor pressure, the cell will plasmolyze. Turgor pressure exerted by vacuoles is also required for cellular elongation: as the cell wall is partially degraded by the action of expansins, the less rigid wall is expanded by the pressure coming from within the vacuole. Turgor pressure exerted by the vacuole is also essential in supporting plants in an upright position. Another function of a central vacuole is that it pushes all contents of the cell's cytoplasm against the cellular membrane, and thus keeps the chloroplasts closer to light.^[21] Most plants store chemicals in the vacuole that react with chemicals in the cytosol. If the cell is broken, for example by a herbivore, then the two chemicals can react forming toxic chemicals. In garlic, alliin and the enzyme alliinase are normally separated but form allicin if the vacuole is broken. A similar reaction is responsible for the production of syn-propanethial-S-oxide when onions are cut.^{[citation needed]}

Vacuoles in fungal cells perform similar functions to those in plants and there can be more than one vacuole per cell. In yeast cells the vacuole (Vac7) is a dynamic structure that can rapidly modify its morphology. They are involved in many processes including the homeostasis of cell pH and the concentration of ions, osmoregulation, storing amino acids and polyphosphate and degradative processes. Toxic ions, such as strontium (Sr²⁺
), cobalt(II) (Co²⁺
), and lead(II) (Pb²⁺
) are transported into the vacuole to isolate them from the rest of the cell.^[22]

Contractile

A contractile vacuole is a specialized osmoregulatory organelle that is present in many free-living protists.^[23] The contractile vacuole is part of the contractile vacuole complex which includes radial arms and a spongiome. The contractile vacuole complex works periodically contracts to remove excess water and ions from the cell to balance water flow into the cell.^[24] When the contractile vacuole is slowly taking water in, the contractile vacuole enlarges, this is called diastole and when it reaches its threshold, the central vacuole contracts then contracts (systole) periodically to release water.^[25]

Digestive

Food vacuoles (also called digestive vacuole^[26]) are organelles found in Ciliates, and Plasmodium falciparum, a protozoan parasite that causes Malaria.

Histopathology

In histopathology, vacuolization is the formation of vacuoles or vacuole-like structures, within or adjacent to cells. It is an unspecific sign of disease.^{[citation needed]}

References

^ Venes D (2001). Taber's Cyclopedic Medical Dictionary (Twentieth ed.). Philadelphia: F.A. Davis Company. p. 2287. ISBN 0-9762548-3-2.
^ Schulz-Vogt HN (2006). "Vacuoles". Inclusions in Prokaryotes. Microbiology Monographs. Vol. 1. pp. 295–298. doi:10.1007/3-540-33774-1_10. ISBN 978-3-540-26205-3.
^ Brooker RJ, Widmaier EP, Graham LE, Stiling PD (2007). Biology (First ed.). New York: McGraw-Hill. pp. 79. ISBN 978-0-07-326807-1.
^ Spallanzani L (1776). "Observations et expériences faites sur les Animalicules des Infusions". L'École Polytechnique. Paris: 1920.
^ Dujardin F (1841). "Histoire naturelle des zoophytes: Infusoires". Librairie Encyclopédique de Roret. Paris.
^ Schleiden MJ (1842). "Grundzüge der wissenschaftlichen Botanik". Leipzig: W. Engelmann. {{cite journal}}: Cite journal requires |journal= (help)
^ Wayne R (2009). Plant Cell Biology: From Astronomy to Zoology. Amsterdam: Elsevier/Academic Press. p. 101. ISBN 9780080921273.
^ de Vries H (1885). "Plasmolytische Studien über die Wand der Vakuolen". Jahrb. Wiss. Bot. 16: 465–598.
^ Okubo-Kurihara E, Sano T, Higaki T, Kutsuna N, Hasezawa S (January 2009). "Acceleration of vacuolar regeneration and cell growth by overexpression of an aquaporin NtTIP1;1 in tobacco BY-2 cells". Plant & Cell Physiology. 50 (1): 151–60. doi:10.1093/pcp/pcn181. PMID 19042915.
^ Matile P (1993). "Chapter 18: Vacuoles, discovery of lysosomal origin". Discoveries in Plant Biology. Vol. 1. World Scientific Publishing Co Pte Ltd.
^ Thomas Boller Archived 2013-12-06 at the Wayback Machine. Plantbiology.unibas.ch. Retrieved on 2011-09-02.
^ For example the food vacuole in Plasmodium.
^ Jezbera J, Hornák K, Simek K (May 2005). "Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of fluorescence in situ hybridization". FEMS Microbiology Ecology. 52 (3): 351–63. doi:10.1016/j.femsec.2004.12.001. PMID 16329920.
^ ^a ^b Becker B (2007). Function and evolution of the vacuolar compartment in green algae and land plants (Viridiplantae). International Review of Cytology. Vol. 264. pp. 1–24. doi:10.1016/S0074-7696(07)64001-7. ISBN 9780123742636. PMID 17964920.
^ Plant cells vs. Animal cells Archived 2019-02-01 at the Wayback Machine. Biology-Online.org
^ William F. Ganong, MD (2003). Review of medical physiology (21st ed.).
^ Reggiori F (2006). "Membrane Origin for Autophagy". Current Topics in Developmental Biology Volume 74. Vol. 74. pp. 1–30. doi:10.1016/S0070-2153(06)74001-7. ISBN 9780121531744. PMC 7112310. PMID 16860663.
^ Knodler LA, Steele-Mortimer O (September 2003). "Taking possession: biogenesis of the Salmonella-containing vacuole". Traffic. 4 (9): 587–99. doi:10.1034/j.1600-0854.2003.00118.x. PMID 12911813. S2CID 25646573.
^ Alberts B, Johnson B, Lewis A, Raff J, Roberts K, Walter P (2008). Molecular Biology of the Cell (Fifth ed.). New York: Garland Science. p. 781. ISBN 978-0-8153-4111-6.
^ Li WY, Wong FL, Tsai SN, Phang TH, Shao G, Lam HM (June 2006). "Tonoplast-located GmCLC1 and GmNHX1 from soybean enhance NaCl tolerance in transgenic bright yellow (BY)-2 cells". Plant, Cell & Environment. 29 (6): 1122–37. doi:10.1111/j.1365-3040.2005.01487.x. PMID 17080938.
^ Taiz L, Zeiger E (2002). Plant Physiology (3rd ed.). Sinauer. pp. 13–14. ISBN 0-87893-856-7.
^ Klionsky DJ, Herman PK, Emr SD (September 1990). "The fungal vacuole: composition, function, and biogenesis". Microbiological Reviews. 54 (3): 266–92. doi:10.1128/MMBR.54.3.266-292.1990. PMC 372777. PMID 2215422.
^ Essid, Miriam; Gopaldass, Navin; Yoshida, Kunito; Merrifield, Christien; Soldati, Thierry (April 2012). Brennwald, Patrick (ed.). "Rab8a regulates the exocyst-mediated kiss-and-run discharge of the Dictyostelium contractile vacuole". Molecular Biology of the Cell. 23 (7): 1267–1282. doi:10.1091/mbc.e11-06-0576. ISSN 1059-1524. PMC 3315810. PMID 22323285.
^ Plattner, Helmut (2015-04-03). "The contractile vacuole complex of protists – New cues to function and biogenesis". Critical Reviews in Microbiology. 41 (2): 218–227. doi:10.3109/1040841X.2013.821650. ISSN 1040-841X. PMID 23919298. S2CID 11384111.
^ Pappas, George D.; Brandt, Philip W. (1958). "The Fine Structure of the Contractile Vacuole in Ameba". The Journal of Biophysical and Biochemical Cytology. 4 (4): 485–488. doi:10.1083/jcb.4.4.485. ISSN 0095-9901. JSTOR 1603216. PMC 2224495. PMID 13563556.
^ "Food vacuole | biology". Encyclopedia Britannica. Retrieved 2021-02-21.

External links

[1] Venes D (2001). Taber's Cyclopedic Medical Dictionary (Twentieth ed.). Philadelphia: F.A. Davis Company. p. 2287. ISBN 0-9762548-3-2.

[bacteria2-2] Schulz-Vogt HN (2006). "Vacuoles". Inclusions in Prokaryotes. Microbiology Monographs. Vol. 1. pp. 295–298. doi:10.1007/3-540-33774-1_10. ISBN 978-3-540-26205-3.

[3] Brooker RJ, Widmaier EP, Graham LE, Stiling PD (2007). Biology (First ed.). New York: McGraw-Hill. pp. 79. ISBN 978-0-07-326807-1.

[4] Spallanzani L (1776). "Observations et expériences faites sur les Animalicules des Infusions". L'École Polytechnique. Paris: 1920.

[5] Dujardin F (1841). "Histoire naturelle des zoophytes: Infusoires". Librairie Encyclopédique de Roret. Paris.

[6] Schleiden MJ (1842). "Grundzüge der wissenschaftlichen Botanik". Leipzig: W. Engelmann. {{cite journal}}: Cite journal requires |journal= (help)

[7] Wayne R (2009). Plant Cell Biology: From Astronomy to Zoology. Amsterdam: Elsevier/Academic Press. p. 101. ISBN 9780080921273.

[8] Vries H (1885). "Plasmolytische Studien über die Wand der Vakuolen". Jahrb. Wiss. Bot. 16: 465–598.

[pmid190429152-9] Okubo-Kurihara E, Sano T, Higaki T, Kutsuna N, Hasezawa S (January 2009). "Acceleration of vacuolar regeneration and cell growth by overexpression of an aquaporin NtTIP1;1 in tobacco BY-2 cells". Plant & Cell Physiology. 50 (1): 151–60. doi:10.1093/pcp/pcn181. PMID 19042915.

[10] Matile P (1993). "Chapter 18: Vacuoles, discovery of lysosomal origin". Discoveries in Plant Biology. Vol. 1. World Scientific Publishing Co Pte Ltd.

[11] Thomas Boller Archived 2013-12-06 at the Wayback Machine. Plantbiology.unibas.ch. Retrieved on 2011-09-02.

[12] For example the food vacuole in Plasmodium.

[13] Jezbera J, Hornák K, Simek K (May 2005). "Food selection by bacterivorous protists: insight from the analysis of the food vacuole content by means of fluorescence in situ hybridization". FEMS Microbiology Ecology. 52 (3): 351–63. doi:10.1016/j.femsec.2004.12.001. PMID 16329920.

[Becker2-14] Becker B (2007). Function and evolution of the vacuolar compartment in green algae and land plants (Viridiplantae). International Review of Cytology. Vol. 264. pp. 1–24. doi:10.1016/S0074-7696(07)64001-7. ISBN 9780123742636. PMID 17964920.

[15] Plant cells vs. Animal cells Archived 2019-02-01 at the Wayback Machine. Biology-Online.org

[Ganong20032-16] William F. Ganong, MD (2003). Review of medical physiology (21st ed.).

[17] Reggiori F (2006). "Membrane Origin for Autophagy". Current Topics in Developmental Biology Volume 74. Vol. 74. pp. 1–30. doi:10.1016/S0070-2153(06)74001-7. ISBN 9780121531744. PMC 7112310. PMID 16860663.

[18] Knodler LA, Steele-Mortimer O (September 2003). "Taking possession: biogenesis of the Salmonella-containing vacuole". Traffic. 4 (9): 587–99. doi:10.1034/j.1600-0854.2003.00118.x. PMID 12911813. S2CID 25646573.

[19] Alberts B, Johnson B, Lewis A, Raff J, Roberts K, Walter P (2008). Molecular Biology of the Cell (Fifth ed.). New York: Garland Science. p. 781. ISBN 978-0-8153-4111-6.

[20] Li WY, Wong FL, Tsai SN, Phang TH, Shao G, Lam HM (June 2006). "Tonoplast-located GmCLC1 and GmNHX1 from soybean enhance NaCl tolerance in transgenic bright yellow (BY)-2 cells". Plant, Cell & Environment. 29 (6): 1122–37. doi:10.1111/j.1365-3040.2005.01487.x. PMID 17080938.

[21] Taiz L, Zeiger E (2002). Plant Physiology (3rd ed.). Sinauer. pp. 13–14. ISBN 0-87893-856-7.

[22] Klionsky DJ, Herman PK, Emr SD (September 1990). "The fungal vacuole: composition, function, and biogenesis". Microbiological Reviews. 54 (3): 266–92. doi:10.1128/MMBR.54.3.266-292.1990. PMC 372777. PMID 2215422.

[23] Essid, Miriam; Gopaldass, Navin; Yoshida, Kunito; Merrifield, Christien; Soldati, Thierry (April 2012). Brennwald, Patrick (ed.). "Rab8a regulates the exocyst-mediated kiss-and-run discharge of the Dictyostelium contractile vacuole". Molecular Biology of the Cell. 23 (7): 1267–1282. doi:10.1091/mbc.e11-06-0576. ISSN 1059-1524. PMC 3315810. PMID 22323285.

[24] Plattner, Helmut (2015-04-03). "The contractile vacuole complex of protists – New cues to function and biogenesis". Critical Reviews in Microbiology. 41 (2): 218–227. doi:10.3109/1040841X.2013.821650. ISSN 1040-841X. PMID 23919298. S2CID 11384111.

[25] Pappas, George D.; Brandt, Philip W. (1958). "The Fine Structure of the Contractile Vacuole in Ameba". The Journal of Biophysical and Biochemical Cytology. 4 (4): 485–488. doi:10.1083/jcb.4.4.485. ISSN 0095-9901. JSTOR 1603216. PMC 2224495. PMID 13563556.

[26] "Food vacuole | biology". Encyclopedia Britannica. Retrieved 2021-02-21.

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Vacuole

Discovery

Function

Types

Central

Contractile

Digestive

Histopathology

References

External links

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